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Showing 3 results for naghavi
Report of five species of plant parasitic nematodes associated with hawthorn forest trees in western Iran
Zeinab Zolfaghari, Eadi Bazgir, Arezoo Naghavi,
Volume 9, Issue 1 (3-2020)
Abstract
Z, Bazgir E, Naghavi A (2020) Report of five species of plant parasitic nematodes associated with hawthorn forest trees in western Iran. Plant Pathology Science 9(1):15-29. DOI: 10.2982/PPS.9.1.15
Introduction: The Hoplolaimidae family is one of the largest and economically most important families of the order/ infraorder Tylenchida / Tylenchomorpha. The members of this family spread all over the world and can be found under different climatic conditions. Some species in this family are serious plant parasites and significantly reduce crop yields. Materials and Methods: In the forests of Khorramabad city in western Iran 70 samples were collected from the soil around the roots of hawthorn trees in the period of 2017-2019. After recording the properties of each sample, they were transferred to a laboratory and cooled at 4 °C. The nematodes were extracted from the soil using the tray method, then fixed and transferred to pure glycerin, and permanent slides were made. The morphological and morphometric properties of the nematodes were examined using a light microscope equipped with a Dino Capture camera. The nematode species were identified using scientific identification keys. Results: Five species of plant parasitic nematodes belonging to two genera of Hoplolaimidae were identified in this study, including Rotylenchus goodeyi, Helicotylenchus canadensis, H. digonicus, H. vulgaris and H. tunisiensis. Conclusion: R. goodeyi is reporting as a new record for the nematode fauna of Iran. Morphometrical and morphological characteristics of these nemadodes are described here.

Phylogenetic status of Grapevine fanleaf virus isolate of Lorestan province of Iran
Samira Pakbaz, Mostafa Darvishnia, Arezoo Naghavi,
Volume 11, Issue 1 ((Autumn & Winter) 2022)
Abstract
Pakbaz S, Darvishnia M, Naghavi A (2022) Phylogenetic status of Grapevine fanleaf virus isolate of Lorestan province of Iran. Plant Pathology Science 11(1):1-12.                     Doi: 10.2982/PPS.11.1.1
 
Introduction: Grapevine fanleaf virus (GFLV) is a major grapevine infecting virus in the world. Materials and Methods: Grapes showing GFLV signs were sampled from the suburbs of the city of Khorramabad in Lorestan Province of Iran in spring 2020 and RT-PCR test was performed to amplify their GFLV-CP gene and the product was sequenced. Results: Specific primers were able to amplify a 1515 bp fragment of the CP gene. Based on the nucleotide sequence of this fragment, GFLV was first identified in this region. The nucleotide sequence similarity of this isolate was detected at 89.14-95.64% with other isolates in the NCBI library. Also, the phylogenetic tree of these isolates, based on the genomic CP region, grouped GFLV isolates into two groups I and II. The Lorestan GFLV isolate was placed in a subgroup in Group I together with GFLV isolates from the northwestern part of Iran and the Takestan isolate, and isolates from other countries were grouped in a separate subgroup of this group. Also in the phylogenetic tree, the Northeast isolates and the Fars and Kohgiloyeh & Boyer-Ahmad province isolates were classified in Group II. Conclusion: The results of this research indicate that the virus is endemic and that its likely origin was in Iran and then spread to other parts of the world. The impact of geographic segregation on the evolution of GFLV can also be deduced.

 
Morphological and molecular characteristics of two species of Psilnchus (Nematoda: Psilenchidae) from the Taf region of Lorestan province, Iran
Dr. Arezoo Naghavi, Dr. Farahnaz Jahanshahi Afshar, Dr. Eidi Bazgir, Dr. Zahra Mirzaeipour,
Volume 13, Issue 2 ((Spring and Summer) 2024)
Abstract
The species of the genus Psilenchus are weak parasites of plants and mosses that feed on hairy roots and epidermal cells of root. Previously, the members of the genus were placed in the family Tylenchidae because of having weak stylet and elongate tail, but because of the didelphys uterus and the presence of phasmid on the tail, they were more similar to the members of the supper family Dolichodoroidea, so “Psilenchidae”, as a new family with two subfamilies Antarctenchinae (Stylet knobbed and vulva with lateral membranes and epiptygma) and Psilenchinae (Stylet not knobbed and vulva without lateral membranes and epiptygma) was established. The genus Psilenchus currently has 21 valid species (only four species have been sequenced), of which 10 species have been recorded from Iran. About 100 samples were collected from the rhizosphere of fruit and forest trees in Taf region of Khoramabad county in 2022 and 2023. The nematodes were extracted using tray method and after fixation, permanent slides were prepared. The morphological and morphometric characteristics of the samples were examined, then a molecular study was performed using the D2-D3 28S rDNA marker. Two species, Psilenchus curcumerus and P. vinciguerrae, were identified with one and two sequences, respectively. This is the first report of these two species from the region. These two species were confirmed based on morphometric and morphological characteristics and phylogeny studies.

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